docs: add comprehensive command surface analysis

Deep analysis of the full `lore` CLI command surface (34 commands across
6 categories) covering command inventory, data flow, overlap analysis,
and optimization proposals.

Document structure:
- Main consolidated doc: docs/command-surface-analysis.md (1251 lines)
- Split sections in docs/command-surface-analysis/ for navigation:
  00-overview.md      - Summary, inventory, priorities
  01-entity-commands.md   - issues, mrs, notes, search, count
  02-intelligence-commands.md - who, timeline, me, file-history, trace, related, drift
  03-pipeline-and-infra.md    - sync, ingest, generate-docs, embed, diagnostics
  04-data-flow.md     - Shared data source map, command network graph
  05-overlap-analysis.md  - Quantified overlap percentages for every command pair
  06-agent-workflows.md   - Common agent flows, round-trip costs, token profiles
  07-consolidation-proposals.md  - 5 proposals to reduce 34 commands to 29
  08-robot-optimization-proposals.md - 6 proposals for --include, --batch, --depth
  09-appendices.md    - Robot output envelope, field presets, exit codes

Key findings:
- High overlap pairs: who-workload/me (~85%), health/doctor (~90%)
- 5 consolidation proposals to reduce command count by 15%
- 6 robot-mode optimization proposals targeting agent round-trip reduction
- Full DB table mapping and data flow documentation

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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# Robot-Mode Optimization Proposals
6 proposals to reduce round trips and token waste for agent consumers.
---
## A. `--include` flag for embedded sub-queries (P0)
**Problem:** The #1 agent inefficiency. Every "understand this entity" workflow requires 3-4 serial round trips: detail + timeline + related + trace.
**Proposal:** Add `--include` flag to detail commands that embeds sub-query results in the response.
```bash
# Before: 4 round trips, ~12000 tokens
lore -J issues 42 -p proj
lore -J timeline "issue:42" -p proj --limit 20
lore -J related issues 42 -p proj -n 5
lore -J trace src/auth/ -p proj
# After: 1 round trip, ~5000 tokens (sub-queries use reduced limits)
lore -J issues 42 -p proj --include timeline,related
```
### Include Matrix
| Base Command | Valid Includes | Default Limits |
|---|---|---|
| `issues <iid>` | `timeline`, `related`, `trace` | 20 events, 5 related, 5 chains |
| `mrs <iid>` | `timeline`, `related`, `file-changes` | 20 events, 5 related |
| `trace <path>` | `experts`, `timeline` | 5 experts, 20 events |
| `me` | `detail` (inline top-N item details) | 3 items detailed |
| `search` | `detail` (inline top-N result details) | 3 results detailed |
### Response Shape
Included data uses `_` prefix to distinguish from base fields:
```json
{
"ok": true,
"data": {
"iid": 42, "title": "Fix auth", "state": "opened",
"discussions": [...],
"_timeline": {
"event_count": 15,
"events": [...]
},
"_related": {
"similar_entities": [...]
}
},
"meta": {
"elapsed_ms": 200,
"_timeline_ms": 45,
"_related_ms": 120
}
}
```
### Error Handling
Sub-query errors are non-fatal. If Ollama is down, `_related` returns an error instead of failing the whole request:
```json
{
"_related_error": "Ollama unavailable — related results skipped"
}
```
### Limit Control
```bash
# Custom limits for included data
lore -J issues 42 --include timeline:50,related:10
```
### Round-Trip Savings
| Workflow | Before | After | Savings |
|---|---|---|---|
| Understand an issue | 4 calls | 1 call | **75%** |
| Why was code changed | 3 calls | 1 call | **67%** |
| Find and understand | 4 calls | 2 calls | **50%** |
**Effort:** High. Each include needs its own sub-query executor, error isolation, and limit enforcement. But the payoff is massive — this single feature halves agent round trips.
---
## B. `--depth` control on `me` (P0)
**Problem:** `me` returns 2000-5000 tokens. Agents checking "do I have work?" only need ~100 tokens.
**Proposal:** Add `--depth` flag with three levels.
```bash
# Counts only (~100 tokens) — "do I have work?"
lore -J me --depth counts
# Titles (~400 tokens) — "what work do I have?"
lore -J me --depth titles
# Full (current behavior, 2000+ tokens) — "give me everything"
lore -J me --depth full
lore -J me # same as --depth full
```
### Depth Levels
| Level | Includes | Typical Tokens |
|---|---|---|
| `counts` | `summary` block only (counts, no items) | ~100 |
| `titles` | summary + item lists with minimal fields (iid, title, attention_state) | ~400 |
| `full` | Everything: items, activity, inbox, discussions | ~2000-5000 |
### Response at `--depth counts`
```json
{
"ok": true,
"data": {
"username": "jdoe",
"summary": {
"project_count": 3,
"open_issue_count": 5,
"authored_mr_count": 2,
"reviewing_mr_count": 1,
"needs_attention_count": 3
}
}
}
```
### Response at `--depth titles`
```json
{
"ok": true,
"data": {
"username": "jdoe",
"summary": { ... },
"open_issues": [
{ "iid": 42, "title": "Fix auth", "attention_state": "needs_attention" }
],
"open_mrs_authored": [
{ "iid": 99, "title": "Refactor auth", "attention_state": "needs_attention" }
],
"reviewing_mrs": []
}
}
```
**Effort:** Low. The data is already available; just need to gate serialization by depth level.
---
## C. `--batch` flag for multi-entity detail (P1)
**Problem:** After search/timeline, agents discover N entity IIDs and need detail on each. Currently N round trips.
**Proposal:** Add `--batch` flag to `issues` and `mrs` detail mode.
```bash
# Before: 3 round trips
lore -J issues 42 -p proj
lore -J issues 55 -p proj
lore -J issues 71 -p proj
# After: 1 round trip
lore -J issues --batch 42,55,71 -p proj
```
### Response
```json
{
"ok": true,
"data": {
"results": [
{ "iid": 42, "title": "Fix auth", "state": "opened", ... },
{ "iid": 55, "title": "Add SSO", "state": "opened", ... },
{ "iid": 71, "title": "Token refresh", "state": "closed", ... }
],
"errors": [
{ "iid": 99, "error": "Not found" }
]
}
}
```
### Constraints
- Max 20 IIDs per batch
- Individual errors don't fail the batch (partial results returned)
- Works with `--include` for maximum efficiency: `--batch 42,55 --include timeline`
- Works with `--fields minimal` for token control
**Effort:** Medium. Need to loop the existing detail handler and compose results.
---
## D. Composite `context` command (P2)
**Problem:** Agents need full context on an entity but must learn `--include` syntax. A purpose-built command is more discoverable.
**Proposal:** Add `context` command that returns detail + timeline + related in one call.
```bash
lore -J context issues 42 -p proj
lore -J context mrs 99 -p proj
```
### Equivalent To
```bash
lore -J issues 42 -p proj --include timeline,related
```
But with optimized defaults:
- Timeline: 20 most recent events, max 3 evidence notes
- Related: top 5 entities
- Discussions: truncated after 5 threads
- Non-fatal: Ollama-dependent parts gracefully degrade
### Response Shape
Same as `issues <iid> --include timeline,related` but with the reduced defaults applied.
### Relationship to `--include`
`context` is sugar for the most common `--include` pattern. Both mechanisms can coexist:
- `context` for the 80% case (agents wanting full entity understanding)
- `--include` for custom combinations
**Effort:** Medium. Thin wrapper around detail + include pipeline.
---
## E. `--max-tokens` response budget (P3)
**Problem:** Response sizes vary wildly (100 to 8000 tokens). Agents can't predict cost in advance.
**Proposal:** Let agents cap response size. Server truncates to fit.
```bash
lore -J me --max-tokens 500
lore -J timeline "feature" --max-tokens 1000
lore -J context issues 42 --max-tokens 2000
```
### Truncation Strategy (priority order)
1. Apply `--fields minimal` if not already set
2. Reduce array lengths (newest/highest-score items survive)
3. Truncate string fields (descriptions, snippets) to 200 chars
4. Omit null/empty fields
5. Drop included sub-queries (if using `--include`)
### Meta Notice
```json
{
"meta": {
"elapsed_ms": 50,
"truncated": true,
"original_tokens": 3500,
"budget_tokens": 1000,
"dropped": ["_related", "discussions[5:]", "activity[10:]"]
}
}
```
### Implementation Notes
Token estimation: rough heuristic based on JSON character count / 4. Doesn't need to be exact — the goal is "roughly this size" not "exactly N tokens."
**Effort:** High. Requires token estimation, progressive truncation logic, and tracking what was dropped.
---
## F. `--format tsv` for list commands (P3)
**Problem:** JSON is verbose for tabular data. List commands return arrays of objects with repeated key names.
**Proposal:** Add `--format tsv` for list commands.
```bash
lore -J issues --format tsv --fields iid,title,state -n 10
```
### Output
```
iid title state
42 Fix auth opened
55 Add SSO opened
71 Token refresh closed
```
### Token Savings
| Command | JSON tokens | TSV tokens | Savings |
|---|---|---|---|
| `issues -n 50 --fields minimal` | ~800 | ~250 | **69%** |
| `mrs -n 50 --fields minimal` | ~800 | ~250 | **69%** |
| `who expert -n 10` | ~300 | ~100 | **67%** |
| `notes -n 50 --fields minimal` | ~1000 | ~350 | **65%** |
### Applicable Commands
TSV works well for flat, tabular data:
- `issues` (list), `mrs` (list), `notes` (list)
- `who expert`, `who overlap`, `who reviews`
- `count`
TSV does NOT work for nested/complex data:
- Detail views (discussions are nested)
- Timeline (events have nested evidence)
- Search (nested explain, labels arrays)
- `me` (multiple sections)
### Agent Parsing
Most LLMs parse TSV naturally. Agents that need structured data can still use JSON.
**Effort:** Medium. Tab-separated serialization for flat structs is straightforward. Need to handle escaping for body text containing tabs/newlines.
---
## Impact Summary
| Optimization | Priority | Effort | Round-Trip Savings | Token Savings |
|---|---|---|---|---|
| `--include` | P0 | High | **50-75%** | Moderate |
| `--depth` on `me` | P0 | Low | None | **60-80%** |
| `--batch` | P1 | Medium | **N-1 per batch** | Moderate |
| `context` command | P2 | Medium | **67-75%** | Moderate |
| `--max-tokens` | P3 | High | None | **Variable** |
| `--format tsv` | P3 | Medium | None | **65-69% on lists** |
### Implementation Order
1. **`--depth` on `me`** — lowest effort, high value, no risk
2. **`--include` on `issues`/`mrs` detail** — highest impact, start with `timeline` include only
3. **`--batch`** — eliminates N+1 pattern
4. **`context` command** — sugar on top of `--include`
5. **`--format tsv`** — nice-to-have, easy to add incrementally
6. **`--max-tokens`** — complex, defer until demand is clear