Wave 7: Phase 2 features - sync --all, external refs, cross-alias discovery, CI/CD, reliability tests (bd-1ky, bd-1bp, bd-1rk, bd-1lj, bd-gvr, bd-1x5)

- Sync --all with async concurrency, per-host throttling, failure budgets, resumable execution
- External ref bundling at fetch time with origin tracking
- Cross-alias discovery (--all-aliases) for list and search commands
- CI/CD pipeline (.gitlab-ci.yml), cargo-deny config, Dockerfile, install script
- Reliability test suite: crash consistency (8 tests), lock contention (3 tests), property-based (4 tests)
- Criterion performance benchmarks (5 benchmarks)
- Bug fix: doctor --fix now repairs missing index.json when raw.json exists
- Bug fix: shared $ref references no longer incorrectly flagged as circular (refs.rs)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

Cargo.lock

@@ -125,6 +125,21 @@ version = "0.22.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "72b3254f16251a8381aa12e40e3c4d2f0199f8c6508fbecb9d91f575e0fbb8c6"
 
+[[package]]
+name = "bit-set"
+version = "0.8.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "08807e080ed7f9d5433fa9b275196cfc35414f66a0c79d864dc51a0d825231a3"
+dependencies = [
+ "bit-vec",
+]
+
+[[package]]
+name = "bit-vec"
+version = "0.8.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "5e764a1d40d510daf35e07be9eb06e75770908c27d411ee6c92109c9840eaaf7"
+
 [[package]]
 name = "bitflags"
 version = "2.10.0"
@@ -507,6 +522,21 @@ dependencies = [
  "winapi",
 ]
 
+[[package]]
+name = "futures"
+version = "0.3.31"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "65bc07b1a8bc7c85c5f2e110c476c7389b4554ba72af57d8445ea63a576b0876"
+dependencies = [
+ "futures-channel",
+ "futures-core",
+ "futures-executor",
+ "futures-io",
+ "futures-sink",
+ "futures-task",
+ "futures-util",
+]
+
 [[package]]
 name = "futures-channel"
 version = "0.3.31"
@@ -514,6 +544,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2dff15bf788c671c1934e366d07e30c1814a8ef514e1af724a602e8a2fbe1b10"
 dependencies = [
  "futures-core",
+ "futures-sink",
 ]
 
 [[package]]
@@ -522,6 +553,17 @@ version = "0.3.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "05f29059c0c2090612e8d742178b0580d2dc940c837851ad723096f87af6663e"
 
+[[package]]
+name = "futures-executor"
+version = "0.3.31"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1e28d1d997f585e54aebc3f97d39e72338912123a67330d723fdbb564d646c9f"
+dependencies = [
+ "futures-core",
+ "futures-task",
+ "futures-util",
+]
+
 [[package]]
 name = "futures-io"
 version = "0.3.31"
@@ -557,6 +599,7 @@ version = "0.3.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9fa08315bb612088cc391249efdc3bc77536f16c91f6cf495e6fbe85b20a4a81"
 dependencies = [
+ "futures-channel",
  "futures-core",
  "futures-io",
  "futures-macro",
@@ -1296,6 +1339,31 @@ dependencies = [
  "unicode-ident",
 ]
 
+[[package]]
+name = "proptest"
+version = "1.10.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "37566cb3fdacef14c0737f9546df7cfeadbfbc9fef10991038bf5015d0c80532"
+dependencies = [
+ "bit-set",
+ "bit-vec",
+ "bitflags",
+ "num-traits",
+ "rand",
+ "rand_chacha",
+ "rand_xorshift",
+ "regex-syntax",
+ "rusty-fork",
+ "tempfile",
+ "unarray",
+]
+
+[[package]]
+name = "quick-error"
+version = "1.2.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "a1d01941d82fa2ab50be1e79e6714289dd7cde78eba4c074bc5a4374f650dfe0"
+
 [[package]]
 name = "quinn"
 version = "0.11.9"
@@ -1395,6 +1463,15 @@ dependencies = [
  "getrandom 0.3.4",
 ]
 
+[[package]]
+name = "rand_xorshift"
+version = "0.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "513962919efc330f829edb2535844d1b912b0fbe2ca165d613e4e8788bb05a5a"
+dependencies = [
+ "rand_core",
+]
+
 [[package]]
 name = "rayon"
 version = "1.11.0"
@@ -1579,6 +1656,18 @@ version = "1.0.22"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "b39cdef0fa800fc44525c84ccb54a029961a8215f9619753635a9c0d2538d46d"
 
+[[package]]
+name = "rusty-fork"
+version = "0.3.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "cc6bf79ff24e648f6da1f8d1f011e9cac26491b619e6b9280f2b47f1774e6ee2"
+dependencies = [
+ "fnv",
+ "quick-error",
+ "tempfile",
+ "wait-timeout",
+]
+
 [[package]]
 name = "ryu"
 version = "1.0.23"
@@ -1768,8 +1857,10 @@ dependencies = [
  "criterion",
  "directories",
  "fs2",
+ "futures",
  "mockito",
  "predicates",
+ "proptest",
  "regex",
  "reqwest",
  "serde",
@@ -2090,6 +2181,12 @@ version = "1.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "562d481066bde0658276a35467c4af00bdc6ee726305698a55b86e61d7ad82bb"
 
+[[package]]
+name = "unarray"
+version = "0.1.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "eaea85b334db583fe3274d12b4cd1880032beab409c0d774be044d4480ab9a94"
+
 [[package]]
 name = "unicode-ident"
 version = "1.0.23"